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Don't limit characters in a threaded comment to 1,000
Often times a user wants to quote something or several things that appear in an answer (each quote could be about 500 characters long).
It can be somewhat frustrating to make several threaded comments to quote several things (at least under the current mechanics).
The fear of users injecting links deep into a "large" threaded comment could be treated by making such links of the
nofollow type and/or by automatic flagging for checking such comments.